Last updated on 2022-09-11 12:56:54 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| immunarch | 1 | 7 | 5 |
Current CRAN status: ERROR: 1, NOTE: 7, OK: 5
Version: 0.7.0
Check: package dependencies
Result: NOTE
Imports includes 38 non-default packages.
Importing from so many packages makes the package vulnerable to any of
them becoming unavailable. Move as many as possible to Suggests and
use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.7.0
Check: installed package size
Result: NOTE
installed size is 6.6Mb
sub-directories of 1Mb or more:
data 3.3Mb
doc 1.6Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.7.0
Check: running examples for arch ‘i386’
Result: ERROR
Running examples in 'immunarch-Ex.R' failed
The error most likely occurred in:
> ### Name: repLoad
> ### Title: Load immune repertoire files into the R workspace
> ### Aliases: repLoad
>
> ### ** Examples
>
> # To load the data from a single file (note that you don't need to specify the data format):
> file_path <- paste0(system.file(package = "immunarch"), "/extdata/io/Sample1.tsv.gz")
> immdata <- repLoad(file_path)
== Step 1/3: loading repertoire files... ==
Processing "<initial>" ...
-- [1/1] Parsing "D:/temp/RtmpAxeZ7D/RLIBS_16f41444570/immunarch/extdata/io/Sample1.tsv.gz" -- immunarch
== Step 2/3: checking metadata files and merging files... ==
Processing "<initial>" ...
-- Metadata file not found; creating a dummy metadata...
== Step 3/3: processing paired chain data... ==
Done!
>
> # Suppose you have a following structure in your folder:
> # >_ ls
> # immunoseq1.txt
> # immunoseq2.txt
> # immunoseq3.txt
> # metadata.txt
>
> # To load the whole folder with every file in it type:
> file_path <- paste0(system.file(package = "immunarch"), "/extdata/io/")
> immdata <- repLoad(file_path)
== Step 1/3: loading repertoire files... ==
Error in .split_to_batches(.path, "<initial>") :
Input file or directory not found: D:/temp/RtmpAxeZ7D/RLIBS_16f41444570/immunarch/extdata/io/
Calls: repLoad -> .split_to_batches
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64
Version: 0.7.0
Check: running examples for arch ‘x64’
Result: ERROR
Running examples in 'immunarch-Ex.R' failed
The error most likely occurred in:
> ### Name: repLoad
> ### Title: Load immune repertoire files into the R workspace
> ### Aliases: repLoad
>
> ### ** Examples
>
> # To load the data from a single file (note that you don't need to specify the data format):
> file_path <- paste0(system.file(package = "immunarch"), "/extdata/io/Sample1.tsv.gz")
> immdata <- repLoad(file_path)
== Step 1/3: loading repertoire files... ==
Processing "<initial>" ...
-- [1/1] Parsing "D:/temp/RtmpAxeZ7D/RLIBS_16f41444570/immunarch/extdata/io/Sample1.tsv.gz" -- immunarch
== Step 2/3: checking metadata files and merging files... ==
Processing "<initial>" ...
-- Metadata file not found; creating a dummy metadata...
== Step 3/3: processing paired chain data... ==
Done!
>
> # Suppose you have a following structure in your folder:
> # >_ ls
> # immunoseq1.txt
> # immunoseq2.txt
> # immunoseq3.txt
> # metadata.txt
>
> # To load the whole folder with every file in it type:
> file_path <- paste0(system.file(package = "immunarch"), "/extdata/io/")
> immdata <- repLoad(file_path)
== Step 1/3: loading repertoire files... ==
Error in .split_to_batches(.path, "<initial>") :
Input file or directory not found: D:/temp/RtmpAxeZ7D/RLIBS_16f41444570/immunarch/extdata/io/
Calls: repLoad -> .split_to_batches
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64